A study by the National Biodiversity Data Centre identified around 340 potentially damaging species in marine, terrestrial and freshwater habitats. Further studies identify 60 'High Impact' invasive species that have the potential to cause significant damage.
"Realistically, we're talking about 60 or so species but there is very little awareness about them," he says. "One of the big questions we have is how do we get this information across to the person on the ground, who, inadvertently, is the one spreading them."
The species that have gained the most profile on Irish farmland are Japanese Knotweed, Giant Hogweed and the Himalayan Balsam.
"We refer to Japanese Knotweed but there are actually four species of knotweeds and all are damaging," he says.
The plant was first introduced to Ireland from England about 100 years ago having been brought there from Japan.
One of the reasons it became so popular was because it's an ornamental plant that fills vacant niches very quickly.
It spreads by underground rhizomes, the technical name for the part of the plant below ground that acts as a root.
"The rhizomes in Japanese Knotweed are very peculiar in that they grow extremely rapidly and can be seven metres from the last leaf that's overground.
"These rhizomes are very strong and woody and known to cause damage to foundations, particularly where you have damaged foundations to begin with, the rhizomes will get into the crack and grow through that crack and expand.
"We've seen it bring down walls, growing up through tarmac and potentially causing damage to property."
A Welsh homeowner recently successful sued Network Rail for damage caused by Japanese Knotweed to the foundations of his property.
Prof Caffrey believes this ruling, is going to have big ramifications.
"I travel the country a lot and there's a tremendous amount of Japanese Knotweed growing right beside houses.
"A very small fragment of rhizome, as little as a gramme, is capable of creating a new population.
"When landowners, the Office of Public Works (OPW) or those working in construction on the roads are moving topsoil, if there's any Japanese Knotweed in that topsoil, even very small fragments will create new populations.
"We know farmers move quite a bit of soil but this can be spread in the mud on the wheels of a tractor from one location to another.
"Increasingly now, we're seeing knotweed growing where a new house has been constructed and topsoil has been brought in and nobody realises."
The movement of topsoil is the foremost mechanism of spread but it can spread as quickly on the tyres of a tractor, in tracking machinery or even under a Wellington boot.
Prof Caffrey urges farmers to seek professional advice if the plant is present on their land, as control at the earliest possible stage is the best option.
"Cutting is the worst thing you could do because this will cause fragmentation and all you're doing is removing the aboveground part but the rhizomes underneath, the most infectious part, remain.
"Work on this plant should always be overseen by a competent professional. You need to draw up a management plan because it's going to take two or three or even four years," he said.
Generally, the favoured route of treatment is to inject the stems with herbicide, a process that can take up to four years before the plant is eradicated.
Legally, landowners are obliged to excavate knotweed and have it removed to a landfill.
Prof Caffrey believes farmers have a huge role to play in its control and this can be achieved by implementing biosecurity measures like cleaning and disinfecting to prevent the spread.
"I know farmers are very careful about pests and diseases and I would urge them to be equally conscious of the problem that is invasive species," he says.
"Even things like cleaning their boots or tractors, having worked in a certain area, is something that needs to be done and should be mandatory.
"That's the way forward and the only way we're going to stop introducing and spreading invasive species."
He would like to see awareness about invasive species included in the curriculum at primary school level to educate people on how damaging invasive species actually are.
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